So, storywise, when Bacon took over (sorry if i bring back bad memories) Creation Corp had crumbled over the next few months. The first part led by Bacon, took a few months after Creation Corp had fallen, while Charles, Mark, Xira, The Doctor, Springtrap had mysteriously disappeared. Since then, new problems have come up for the new crew. Joanna died (that's Alana and Fritz's daughter) and turned into a phantom, which also resulted in her aging into a teenager prematurely. Also, Shadow Bonnie has risen from the ashes of the '87 location.